Lsa-MIR171a

Basic info.

• miRNA locus ID
• Lsa-MIR171a

• miRNA locus accession
• precursor000374

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_7  155735776  155735897  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

    AAT      -GT  A   A         T         A    CA          ATGG
       GAAGCA   TG ACG GATATTGGT CGGTTCAAT AGAA  CAATGTTCAG    
       ||||||   || ||| ||||||||| ||||||||| ||||  ||||||||||     
       CTTCGT   AC TGT CTATAACCG GCCGAGTTA TCTT  GTTGTAAGTT    
CTCTAAT      GTT  A   A         T         G    TC          GTAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]