Lsa-MIR156d

Basic info.

• miRNA locus ID
• Lsa-MIR156d

• miRNA locus accession
• PmiREN000000006

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_3  30888884  30889009  -

• Comments
• A member of family MIR156

• Confidence level
• 

Secondary strurture and sequence

    TTGCGT  T     ACC          -   GA              GC          AAAA
          GG GGTGA   GGCTGACAGA AGA  GTGAGCACACAAAG  AAATTGTATA    
          || |||||   |||||||||| |||  ||||||||||||||  ||||||||||    T
          CC CTATT   TCGACTGTCT TCT  TACTCGTGTGTTTT  TTTAGTATGT    
CCTATACCCT  -     -CT          A   AG              --          CGAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]