Lsa-MIR319d

Basic info.

• miRNA locus ID
• Lsa-MIR319d

• miRNA locus accession
• PmiREN000000019

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_6  13536198  13536405  -

• Comments
• A member of family MIR319

• Confidence level
• 

Secondary strurture and sequence

     G      AAAAAA   T A                 TTCAT   TT      AAT       -AA  G   AC        C  AA        T  G GCA
   TG TTGATA      CAG G GAGCTTTCTTCAGTTCA     GAG  GTTTAA   TTCAATT   CT CTG  TCATTCAT CA  TACTAAGT AA A   
   || ||||||      ||| | |||||||||||||||||     |||  ||||||   |||||||   || |||  |||||||| ||  |||||||| || |    
   AC AACTAT      GTT C CTCGAGGGAAGTCAGGT     TTC  CGAATT   AGGTTAA   GA GGC  AGTAAGTA GT  ATGATTTA TT T   
CAT  G      -CTGGC   T C                 TTACG   TT      -CT       ACA  G   GA        A  AA        -  G GCC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]