Lsa-MIR319a

Basic info.

• miRNA locus ID
• Lsa-MIR319a

• miRNA locus accession
• PmiREN000000020

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_3  13762547  13762752  +

• Comments
• A member of family MIR319

• Confidence level
• 

Secondary strurture and sequence

GCTAACTTTAA       ---  A            A    T  A    TT  GG      T      A -  G   AC        C  AA       --C  AGA
           GAAAGTA   AG GAGCTTTCTTCA TCCA TC TGGG  AT  TAAGAT CCAATT G CT CCG  TCATTCAT CA  TACTAAG   CA   
           |||||||   || |||||||||||| |||| || ||||  ||  |||||| |||||| | || |||  |||||||| ||  |||||||   ||    
           CTTTCAT   TC CTCGAGGGAAGT AGGT GG ATCT  TG  ATTCTA GGTTAA C GA GGC  AGTAAGTA GT  ATGATTC   GT   
 CATATATTTA       ACT  C            C    T  C    CT  -A      -      A A  G   GT        A  AA       TTA  ACG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]