Lsa-MIR319b

Basic info.

• miRNA locus ID
• Lsa-MIR319b

• miRNA locus accession
• PmiREN000000021

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_6  141873422  141873631  +

• Comments
• A member of family MIR319

• Confidence level
• 

Secondary strurture and sequence

  TAAAA   AGAAAAA     A                 CTC     TGC        A      A -  G   AC        C  AA        ----   AAAA
       GAG       GAAAG GAGCTTTCTTCAGTCCA   ATGGG   CATAAGAT TCAATT G CT CCG  TCATTCAT CA  TACTAAGT    CAA    
       |||       ||||| |||||||||||||||||   |||||   |||||||| |||||| | || |||  |||||||| ||  ||||||||    |||     
       CTC       TTTTC CTCGAGGGAAGTCAGGT   TGTCC   GTATTCTA AGTTAA C GA GGC  AGTAAGTG GT  ATGATTCA    GTT    
ACTATTA   GACCTGG     C                 TCA     TTT        -      A A  G   GT        A  AA        TGAT   GTCC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]