Lsa-MIR319c

Basic info.

• miRNA locus ID
• Lsa-MIR319c

• miRNA locus accession
• PmiREN000000022

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_8  145897905  145898116  -

• Comments
• A member of family MIR319

• Confidence level
• 

Secondary strurture and sequence

                       TTTATCAAAGCAAAAGGGAGCTTCCTTCAGTCCACTCATAGGTGGGTAGAGGGTACGGATTTGCTGCCGACTCATTCATTCAAACACAATAG
                   TTTT                                                                                            
                   ||||                                                                                            A
                   TTCC                                                                                            
AAAATATTTTTCTACCTAG    CTCGAGGGAAGTCAGGTTCGTGTCTCTTCTTTTCCTAATTTAAACAGAGGGCGTAGTAAGTGTGTAAGTGTTATCCAGTTGGTGTACAAGAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]