Lsa-MIR164b

Basic info.

• miRNA locus ID
• Lsa-MIR164b

• miRNA locus accession
• PmiREN000000028

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_5  284244044  284244348  +

• Comments
• A member of family MIR164

• Confidence level
• 

Secondary strurture and sequence

AAGG     GATGAG  A     A    CA         C             --CATG     CTACAAAAGTTTTGCGTTAATTAAACCTTGAAGGTGTTAATCCAACGTACCTAACCCAGCCAAATAGCCTTGACGTCTGGAGTTGATG
    TGGGT      CA GATGG GAAG  GGGCACGTG ATTACTAACTCAT      AAGAC                                                                                        
    |||||      || ||||| ||||  ||||||||| |||||||||||||      |||||                                                                                        G
    ACCCA      GT CTACC CTTC  CCCGTGTAC TGGTGATTGAGTG      GTAGG                                                                                        
  CA     ---ACA  A     G    TA         T             AACAAC     TGATTTTACCTCACATTAACTTCATAAGTTCACCGATTTAATAAGTTTCTAGACATCCACTTAGCGTTTCTTTATATGTTCCCAATTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]