Lsa-MIR166g

Basic info.

• miRNA locus ID
• Lsa-MIR166g

• miRNA locus accession
• PmiREN000000037

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_7  130036801  130036949  +

• Comments
• A member of family MIR166

• Confidence level
• 

Secondary strurture and sequence

ATACA     --T      T        TT G    C       AT    -----        GAAAAAACTCCGCTC
     AGCAG   GGTTTG GGGGGATG  G CTGG TCGATGC  TCAC     TTGCAGGA               
     |||||   |||||| ||||||||  | |||| |||||||  ||||     ||||||||                
     TCGTT   CCAAAC TTCCTTAC  C GACC GGCTACG  AGTG     GACGTCTT               
TAATA     TCC      T        TT G    A       GC    TAAAA        TAAATATCACTTTCA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]