Lsa-MIR167b

Basic info.

• miRNA locus ID
• Lsa-MIR167b

• miRNA locus accession
• PmiREN000000041

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_3  177277329  177277540  -

• Comments
• A member of family MIR167

• Confidence level
• 

Secondary strurture and sequence

 GCCA     -  CTA  A            C  C          ATCTTAAACCATT      --GT         TAT       AT         G     TC    A   AT
     TGTTG GT   AG GATTGAAGCTGC AG ATGATCTGGT             CCATAT    TCTTTATGT   TGTGAGT  TTCTGTCTG TGTAT  TGTG TAT  
     ||||| ||   || |||||||||||| || ||||||||||             ||||||    |||||||||   |||||||  ||||||||| |||||  |||| |||   
     ACAGC CG   TC CTAACTTCGACG TC TACTGGACTA             GGTATA    AGAAGTATA   ACATTCA  GAGGTAGAT ACATA  ATAT ATG  
TATTG     T  TAC  A            T  -          ----------ATT      GAAT         TTC       --         -     -T    -   AG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]