Lsa-MIR167c

Basic info.

• miRNA locus ID
• Lsa-MIR167c

• miRNA locus accession
• PmiREN000000042

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_5  331826138  331826249  -

• Comments
• A member of family MIR167

• Confidence level
• 

Secondary strurture and sequence

   GA       TAT    AC          -  A          A   A   TTTTTA
     TGGGATT   GGAA  AGTGAAGCTG CC GCATGATCTA TTA GGT      
     |||||||   ||||  |||||||||| || |||||||||| ||| |||       
     ACCTTGG   CCTT  TCACTTCGAC GG CGTACTGGAT GAT CCG      
CGTGA       -TT    AT          A  -          C   A   TATAGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]