Lsa-MIR167d

Basic info.

• miRNA locus ID
• Lsa-MIR167d

• miRNA locus accession
• PmiREN000000043

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_9  9752606  9752738  +

• Comments
• A member of family MIR167

• Confidence level
• 

Secondary strurture and sequence

  --     C     GA             -  A               ----         ---C   CTT
GA  TCAAA TGAAG  AAAGGTGAAGCTG CC GCATGATCTAGCCAC    TCTTTTGAT    TGA   
||  ||||| |||||  ||||||||||||| || |||||||||||||||    |||||||||    |||    
CT  AGTTT ATTTC  TTTTCACTTCGGC GG CGTACTGGATCGGTG    AGAAAATTG    ACT   
  TA     T     AT             T  -               CCTA         AAAT   CAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]