Lsa-MIR169d

Basic info.

• miRNA locus ID
• Lsa-MIR169d

• miRNA locus accession
• PmiREN000000053

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_1  71742981  71743112  -

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

              ACCC     T   -     A   -     T    AAAAAT   TC   T        GA
      AGAAGAGT    TTGTT GGT AGCCA GGA TGACT GCCT      ACC  AAT AGGTGTTG  
      ||||||||    ||||| ||| ||||| ||| ||||| ||||      |||  ||| ||||||||  A
      TCTTCTCA    GACAG TCA TCGGT CCT ACTGA CGGA      TGG  TTA TCCACAAT  
ACTCGT        ----     T   A     A   C     -    -CTACT   -T   T        GA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]