Lsa-MIR169e

Basic info.

• miRNA locus ID
• Lsa-MIR169e

• miRNA locus accession
• PmiREN000000054

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_2  152723353  152723488  -

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

    -     C  TG    T   -         T    T     -TT   -T   CT      A   ATTTA
 GAA GGGAA AA  TGTT GGT AGCCAAGGA GACT GCCTG   GCT  TCT  CAAAGG TTT     
 ||| ||||| ||  |||| ||| ||||||||| |||| |||||   |||  |||  |||||| |||      
 CTT CCCTT TT  ACAG TCA TCGGTTCTT CTGA CGGAC   TGG  AGA  GTTTCC AGA     
A   T     C  TA    T   A         -    -     TAT   CC   TT      -   ACTAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]