Lsa-MIR169f

Basic info.

• miRNA locus ID
• Lsa-MIR169f

• miRNA locus accession
• PmiREN000000055

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_4  291125058  291125199  +

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

   -       T TG    TT   -         T    T    -   T  TT TTTT            T  TC
  A AGAAAAG G  TCGT  GGT AGCCAAGGA GACT GCCT ACA TC  C    CAAAGGGTTTTT GG  
  | ||||||| |  ||||  ||| ||||||||| |||| |||| ||| ||  |    |||||||||||| ||  T
  T TCTTTTC C  GGCA  CCA TCGGTTTCT CTGA CGGA TGT GG  G    GTTTCCCAGAAA CT  
AC C       T -T    CT   A         -    -    C   T  CT CTTT            -  TT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]