Lsa-MIR169g

Basic info.

• miRNA locus ID
• Lsa-MIR169g

• miRNA locus accession
• PmiREN000000056

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_4  291167913  291168065  +

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

   -         T  C  TT   -         T    T     -CTTCTTCTTTTCA       CT    CCTTT   AG
  A AGAAAAGAG GT GT  GGT AGCCAAGGA GACT GCCTG              AAGGGTT  TTAG     TTC  
  | ||||||||| || ||  ||| ||||||||| |||| |||||              |||||||  ||||     |||   
  T TCTTTTCTC TA CA  CCA TCGGTTCCT TTGA CGGAC              TTCCCAG  AATC     AAG  
AC C         -  A  CT   A         -    -     TATTGTTTAGTTTG       --    -TAGT   TA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]