Lsa-MIR171d

Basic info.

• miRNA locus ID
• Lsa-MIR171d

• miRNA locus accession
• PmiREN000000063

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_8  84951459  84951579  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  GAGGTCACATTATAA     C          A            AAA  A      ATG
                 GGAAG GATGTTGGTG GGTTCAATCTGA   CG ATTTTA   
                 ||||| |||||||||| ||||||||||||   || ||||||   G
                 CCTTC CTATAACCGT CCGAGTTAGGTT   GC TAAAGT   
CGTTCATTAAGACATTA     A          G            CTA  A      GTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]