Lsa-MIR390

Basic info.

• miRNA locus ID
• Lsa-MIR390

• miRNA locus accession
• PmiREN000000074

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_9  19714467  19714601  -

• Comments
• A member of family MIR390

• Confidence level
• 

Secondary strurture and sequence

  ATAGCA     T       AAA        G        C  -A   A   -GTATA         CT
        GGAAA AATCTGT   GCTCAGGA GGATAGCG CT  CGT TGA      TCGTGTGTG  
        ||||| |||||||   |||||||| |||||||| ||  ||| |||      |||||||||   
        TCTTT TTAGGCA   TGAGTTCT TCTATCGC GA  GCA ACT      AGCATATAC  
CTACCTCA     T       CTC        A        A  AG   -   ATAATA         AT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]