Lsa-MIR477a

Basic info.

• miRNA locus ID
• Lsa-MIR477a

• miRNA locus accession
• PmiREN000000100

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_7  2594550  2594665  -

• Comments
• A member of family MIR477

• Confidence level
• 

Secondary strurture and sequence

  T           TT              C           T      TT  AAT   CA
   ATTAAGGCAGC  TTTGCCATCTCTCC TCAAAGACTTC GACATT  GA   GGC  
   |||||||||||  |||||||||||||| ||||||||||| ||||||  ||   |||  A
   TAGTTCTGTTG  AAACGGTAGGGAGG AGTTTCTGGGG CTGTAA  CT   CTG  
ATC           CC              -           T      -C  ---   AA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]