Single miRNA

Lsa-MIR6114

Basic info.

miRNA locus ID
Lsa-MIR6114

miRNA locus accession
PmiREN000000104

Organism
Lactuca sativa

Genomic location
Lsat_1_v8_lg_1 113222235 113222408 -

Comments
A member of family MIR6114

Confidence level

Secondary strurture and sequence

mature sequence star sequence

5'

3'

  T        T   G  T       A  C    T       ATT   ------    CT             A    GAAGAAAGTCG    GC
   TGTAATCT GTA CA TGAAAGG AT ATGG CGTGAGG   GCT      ATCA  TTGGTTGTCTCTT TTTA           TGAT  
   |||||||| ||| || ||||||| || |||| |||||||   |||      ||||  ||||||||||||| ||||           ||||  T
   GTATTAGA CGT GT ACTTTCC TG TACC GCACTTC   CGA      TAGT  AATCAACGGAGAA AAGT           ACTA  
CTT        T   G  C       C  T    T       ---   AGTTTA    --             -    ---GAAAATGA    AA

Get mature sequence
Get star sequence
Get miRNA stem-loop seqence
Get miRNA stem-loop ± 20bp
Get dot-bracket miRNA secondary structure

miRNA cluster info.

Cluster ID:
Chromosome:
Cluster start:
Cluster end:

No miRNA locus in ± 10k bp interval.

Expression info.

Reads per million (RPM)

Mature miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID	psRNAtarget	RNAhybrid	PARE-Seq? The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.
Lsat_1_v5_gn_0_10080.1	NA	4	NA
Lsat_1_v5_gn_0_40840.1	NA	4	NA
Lsat_1_v5_gn_0_8241.1	NA	3	NA
Lsat_1_v5_gn_0_9061.1	NA	NA	2
Lsat_1_v5_gn_1_108601.1	NA	4	NA
Lsat_1_v5_gn_1_1120.1	NA	4	NA
Lsat_1_v5_gn_1_116521.1	NA	NA	2
Lsat_1_v5_gn_1_17080.1	3	NA	NA
Lsat_1_v5_gn_1_19661.1	NA	4	NA
Lsat_1_v5_gn_1_20080.1	NA	NA	2
Lsat_1_v5_gn_1_23721.1	NA	NA	2
Lsat_1_v5_gn_1_37780.1	NA	NA	2
Lsat_1_v5_gn_1_440.1	NA	4	NA
Lsat_1_v5_gn_1_4600.1	NA	4	NA
Lsat_1_v5_gn_1_50861.1	NA	NA	2
Lsat_1_v5_gn_1_52240.1	0	0	NA
Lsat_1_v5_gn_1_58701.1	NA	4	NA
Lsat_1_v5_gn_1_59920.1	NA	3	NA
Lsat_1_v5_gn_1_65280.1	NA	NA	2
Lsat_1_v5_gn_1_66401.1	NA	NA	2
Lsat_1_v5_gn_1_67501.1	NA	4	NA
Lsat_1_v5_gn_1_74380.1	NA	NA	2
Lsat_1_v5_gn_1_74401.1	NA	NA	1
Lsat_1_v5_gn_1_77960.1	NA	NA	2
Lsat_1_v5_gn_2_102020.1	NA	NA	2
Lsat_1_v5_gn_2_106861.1	1.5	NA	2
Lsat_1_v5_gn_2_117581.1	NA	4	NA
Lsat_1_v5_gn_2_18861.1	NA	NA	2
Lsat_1_v5_gn_2_1980.1	NA	4	NA
Lsat_1_v5_gn_2_2221.1	NA	NA	2
Lsat_1_v5_gn_2_28080.1	NA	3	NA
Lsat_1_v5_gn_2_3721.1	NA	4	NA
Lsat_1_v5_gn_2_3941.1	3	NA	NA
Lsat_1_v5_gn_2_39580.1	NA	4	NA
Lsat_1_v5_gn_2_4240.1	NA	4	NA
Lsat_1_v5_gn_2_54320.1	NA	NA	2
Lsat_1_v5_gn_2_65861.1	NA	4	NA
Lsat_1_v5_gn_2_66100.1	NA	4	NA
Lsat_1_v5_gn_2_69001.1	NA	NA	2
Lsat_1_v5_gn_2_70180.1	NA	NA	2
Lsat_1_v5_gn_2_72960.1	NA	NA	2
Lsat_1_v5_gn_2_7301.1	NA	NA	2
Lsat_1_v5_gn_2_73961.1	NA	NA	2
Lsat_1_v5_gn_3_102381.1	NA	NA	2
Lsat_1_v5_gn_3_14101.1	NA	4	NA
Lsat_1_v5_gn_3_16520.1	3	NA	NA
Lsat_1_v5_gn_3_22060.1	NA	NA	2
Lsat_1_v5_gn_3_41120.1	3	NA	NA
Lsat_1_v5_gn_3_41140.1	3	NA	NA
Lsat_1_v5_gn_3_41180.1	2.5	4	NA
Lsat_1_v5_gn_3_71980.1	NA	4	NA
Lsat_1_v5_gn_3_73300.1	NA	NA	2
Lsat_1_v5_gn_4_1060.1	NA	4	NA
Lsat_1_v5_gn_4_107900.1	NA	3	NA
Lsat_1_v5_gn_4_111181.1	NA	NA	2
Lsat_1_v5_gn_4_127841.1	NA	4	NA
Lsat_1_v5_gn_4_150960.1	NA	NA	2
Lsat_1_v5_gn_4_169080.1	NA	4	NA
Lsat_1_v5_gn_4_170421.1	NA	4	NA
Lsat_1_v5_gn_4_185820.1	NA	NA	2
Lsat_1_v5_gn_4_21500.1	3	NA	NA
Lsat_1_v5_gn_4_6500.1	NA	NA	2
Lsat_1_v5_gn_4_75700.1	NA	NA	2
Lsat_1_v5_gn_4_75780.1	3	NA	NA
Lsat_1_v5_gn_4_76080.1	NA	NA	2
Lsat_1_v5_gn_4_77881.1	NA	4	NA
Lsat_1_v5_gn_4_86141.1	NA	3	NA
Lsat_1_v5_gn_5_101780.1	NA	NA	2
Lsat_1_v5_gn_5_105561.1	NA	4	NA
Lsat_1_v5_gn_5_106261.1	NA	4	NA
Lsat_1_v5_gn_5_106381.1	NA	4	NA
Lsat_1_v5_gn_5_106521.1	NA	4	NA
Lsat_1_v5_gn_5_112961.1	NA	NA	2
Lsat_1_v5_gn_5_121560.1	NA	NA	1
Lsat_1_v5_gn_5_13080.1	NA	NA	2
Lsat_1_v5_gn_5_136720.1	NA	NA	2
Lsat_1_v5_gn_5_158001.1	NA	NA	2
Lsat_1_v5_gn_5_175480.1	NA	4	NA
Lsat_1_v5_gn_5_191280.1	NA	NA	2
Lsat_1_v5_gn_5_29520.1	NA	NA	2
Lsat_1_v5_gn_5_3501.1	NA	NA	2
Lsat_1_v5_gn_5_44701.1	NA	NA	2
Lsat_1_v5_gn_5_88180.1	NA	NA	2
Lsat_1_v5_gn_5_91481.1	NA	NA	2
Lsat_1_v5_gn_6_111660.1	NA	NA	2
Lsat_1_v5_gn_6_116081.1	NA	4	NA
Lsat_1_v5_gn_6_17141.1	NA	3	NA
Lsat_1_v5_gn_6_21360.1	NA	NA	2
Lsat_1_v5_gn_6_2160.1	NA	4	NA
Lsat_1_v5_gn_6_23301.1	NA	4	2
Lsat_1_v5_gn_6_33861.1	NA	4	NA
Lsat_1_v5_gn_6_34261.1	NA	NA	0
Lsat_1_v5_gn_6_4021.1	3	NA	2
Lsat_1_v5_gn_6_41961.1	NA	4	NA
Lsat_1_v5_gn_6_42101.1	2.5	NA	NA
Lsat_1_v5_gn_6_47021.1	NA	4	NA
Lsat_1_v5_gn_6_52280.1	NA	NA	2
Lsat_1_v5_gn_6_52801.1	NA	NA	2
Lsat_1_v5_gn_6_67781.1	NA	NA	2
Lsat_1_v5_gn_6_68740.1	NA	NA	2
Lsat_1_v5_gn_6_79881.1	NA	4	NA
Lsat_1_v5_gn_6_94060.1	2.5	2	NA
Lsat_1_v5_gn_7_101201.1	NA	4	NA
Lsat_1_v5_gn_7_103081.1	NA	4	NA
Lsat_1_v5_gn_7_19840.1	NA	NA	2
Lsat_1_v5_gn_7_34541.1	NA	NA	2
Lsat_1_v5_gn_7_39521.1	NA	4	NA
Lsat_1_v5_gn_7_40700.1	NA	4	NA
Lsat_1_v5_gn_7_46840.1	NA	NA	2
Lsat_1_v5_gn_7_73881.1	NA	NA	2
Lsat_1_v5_gn_7_82040.1	NA	4	NA
Lsat_1_v5_gn_7_99020.1	NA	4	NA
Lsat_1_v5_gn_8_100801.1	NA	4	NA
Lsat_1_v5_gn_8_101001.1	NA	NA	2
Lsat_1_v5_gn_8_123101.1	NA	NA	2
Lsat_1_v5_gn_8_125960.1	NA	3	NA
Lsat_1_v5_gn_8_126900.1	NA	NA	2
Lsat_1_v5_gn_8_128601.1	NA	4	NA
Lsat_1_v5_gn_8_164701.1	3	4	NA
Lsat_1_v5_gn_8_20881.1	NA	4	NA
Lsat_1_v5_gn_8_23661.1	NA	NA	2
Lsat_1_v5_gn_8_29520.1	NA	NA	2
Lsat_1_v5_gn_8_340.1	NA	NA	2
Lsat_1_v5_gn_8_57280.1	NA	NA	2
Lsat_1_v5_gn_8_64200.1	NA	NA	2
Lsat_1_v5_gn_8_67901.1	NA	4	NA
Lsat_1_v5_gn_8_67921.1	NA	4	NA
Lsat_1_v5_gn_8_7660.1	NA	3	NA
Lsat_1_v5_gn_8_85400.1	NA	4	NA
Lsat_1_v5_gn_8_86100.1	NA	NA	1
Lsat_1_v5_gn_8_89661.1	NA	4	NA
Lsat_1_v5_gn_8_89701.1	3	3	NA
Lsat_1_v5_gn_8_91581.1	NA	NA	2
Lsat_1_v5_gn_9_105640.1	NA	3	NA
Lsat_1_v5_gn_9_11460.1	NA	NA	2
Lsat_1_v5_gn_9_21061.1	NA	NA	2
Lsat_1_v5_gn_9_24061.1	NA	4	NA
Lsat_1_v5_gn_9_4121.1	NA	4	2
Lsat_1_v5_gn_9_48081.1	NA	NA	2
Lsat_1_v5_gn_9_62761.1	NA	NA	2
Lsat_1_v5_gn_9_6640.1	NA	NA	2
Lsat_1_v5_gn_9_69161.1	NA	NA	2
Lsat_1_v5_gn_9_81761.1	NA	NA	2