Lsa-MIRN565

Basic info.

• miRNA locus ID
• Lsa-MIRN565

• miRNA locus accession
• PmiREN000000114

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_5  330087012  330087217  +

• Comments
• A member of family MIRN565

• Confidence level
• 

Secondary strurture and sequence

                 C                         C  A         -     G             TT                 -AA   -  A
  ACCTGCTTGTGGGAC ATGGGTTCAACCGCTGTTATATGCA CG TAAAATAGT TATGT GTGGACATGGAGG  CTGAAACGAAGTTGTAC   TCT CA 
  ||||||||||||||| ||||||||||||||||||||||||| || ||||||||| ||||| |||||||||||||  |||||||||||||||||   ||| || G
  TGGACGAACACTTTG TACCCAAGTTGGTGACAATATACGT GC ATTTTGTCA ATACA CACCTGTACCTCT  GACTTTGCTTCAACGTG   AGA GT 
GA               T                         A  A         T     G             TT                 ACA   A  A

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]