Lsa-MIRN1684

Basic info.

• miRNA locus ID
• Lsa-MIRN1684

• miRNA locus accession
• PmiREN000000117

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_5  85851949  85852111  -

• Comments
• A member of family MIRN1684

• Confidence level
• 

Secondary strurture and sequence

   TGC       C     AGT                T           TGA         TTAAGAGAA  ACATTT   GAC
      ATATAAG TTGTT   GGAACCATCCCTTGTT TCTAGGAGAGT   ATGTCATGG         CT      GCA   
      ||||||| |||||   |||||||||||||||| |||||||||||   |||||||||         ||      |||    
      TGTATTC AACAA   CCTTGGTAGGGAGCAA AGATCCTTTCA   TACAGTACC         GG      CGT   
CTTTTA       C     -GT                C           -TG         TAGAAACAA  --GAAT   TAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]