Lsa-MIRN1651

Basic info.

• miRNA locus ID
• Lsa-MIRN1651

• miRNA locus accession
• PmiREN000000130

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_6  55892504  55892632  -

• Comments
• A member of family MIRN1651

• Confidence level
• 

Secondary strurture and sequence

              CTCTT       -  C      -     T          -AACT    T   T  AA
     AGAAGAGTG     ATTAAGT AG CAAGGA TGAAT GCCTAATGAG     CAAG GGG CA  
     |||||||||     ||||||| || |||||| ||||| ||||||||||     |||| ||| ||   
     TTTTCTCAC     TAATTCA TC GTTCTT ACTTG CGGATTACTT     GTTC CTT GT  
CTCTT         ----T       A  A      T     -          CGTTT    -   T  AA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]