Lsa-MIRN1691

Basic info.

• miRNA locus ID
• Lsa-MIRN1691

• miRNA locus accession
• PmiREN000000131

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_2  65058021  65058192  +

• Comments
• A member of family MIRN1691

• Confidence level
• 

Secondary strurture and sequence

  GGAGAGTTAGTGCATCTC    --   TT     G    ATAA    ATCC    TC    TGAATCTATTGGAAAATTATACCACTTG
                    AGGT  ATC  AATTT TCAT    CAAG    GTGT  TTCC                            
                    ||||  |||  ||||| ||||    ||||    ||||  ||||                             
                    TCCG  TAG  TTAAA AGTA    AGAC    TTTG  ACGA                            
ACAATGGGTATTTTATAGCG    AA   -T     G    CCGA    ---C    --    GTTACAGAAGTCAGTTGAAGTCTCAAAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]