Lsa-MIRN1698

Basic info.

• miRNA locus ID
• Lsa-MIRN1698

• miRNA locus accession
• PmiREN000000137

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_6  192804145  192804406  -

• Comments
• A member of family MIRN1698

• Confidence level
• 

Secondary strurture and sequence

     AA     G G     G GT  G    -    GGA         AT     GA ATC    T CGGCGGGTCTTCTAGTCTTCTGCTTCGGCGGAGATCTGGACATCACAGTGCAAACCCGTTAGAGCCGCCCTAG
       GCCAC T GTCGT G  TC AGTC CCAC   TGGCGCCAA  GATGG  C   GACC T                                                                         
       ||||| | ||||| |  || |||| ||||   |||||||||  |||||  |   |||| |                                                                          
       CGGTG G CGGCG C  AG TCGG GGTG   ATCGTGGTT  CTACC  G   GAGG T                                                                         
GAGTCGG     - G     G --  -    T    ---         --     AA --A    - TGGTACCTCCTGGTAGAGTCTAGAAGATCGACTAGATTGAACTGGCAGCCTCGGGCGAGGACCCCGTGTCAGG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]