Lsa-MIRN7087

Basic info.

• miRNA locus ID
• Lsa-MIRN7087

• miRNA locus accession
• PmiREN000000140

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_1  125813996  125814203  +

• Comments
• A member of family MIRN7087

• Confidence level
• 

Secondary strurture and sequence

  AACTTTCATAACCGA                             A     C     AAGGAGAAACACGGAATA  AGTACCTTCTTGGATGATGAAGAGATTGAAAAAGGG
                 TAGCGTAGTTCTTAGACAACACGATGATA AAGTC GAGAT                  TC                                    
                 ||||||||||||||||||||||||||||| ||||| |||||                  ||                                     
                 ATCGCATTAAGAATCTGTTGTGTTATTAT TTCGG CTCTA                  CG                                    
GCTGTGGTACAACTTTC                             C     A     ------------------  GAATTAACGTGAGAGGTTTAGGCCAAAGCTTAGAAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]