Lsa-MIRN7088

Basic info.

• miRNA locus ID
• Lsa-MIRN7088

• miRNA locus accession
• PmiREN000000145

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_1  73849572  73849767  -

• Comments
• A member of family MIRN7088

• Confidence level
• 

Secondary strurture and sequence

            GC      TA           A             A     CTCCTCCTCCATCTTCATTT   CCACCGACCACCATTAGCACCACCACCGTCCACC
    CCAAAGAT  TGCATT  CCTGCATTTGC CCTGCACCTTTCT CTTTT                    TCG                                  
    ||||||||  ||||||  ||||||||||| ||||||||||||| |||||                    |||                                   
    GGTTTTTA  ACGTAA  GGACGTGAACG GGATGTGGAAAGA GAGAA                    GGT                                  
CTTG        --      TC           -             A     -----------------TAA   GAGTGTGGTATACTAATACACTACCGCCACCTGA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]