Single miRNA

Lsa-MIRN7092

Basic info.

miRNA locus ID
Lsa-MIRN7092

miRNA locus accession
PmiREN000000151

Organism
Lactuca sativa

Genomic location
Lsat_1_v8_lg_5 141625110 141625330 -

Comments
A member of family MIRN7092

Confidence level

Secondary strurture and sequence

mature sequence star sequence

5'

3'

TGAGAATTGGAAT  TAAAA TTCTGACATGGGATTATCGAAAATAGGACCTGCTAATCAGCAACACAGCTTTCTTGCCACCAATGTTGTAGGTACCTTTGGGTACGTAGATCCAACA
             GC     T                                                                                                 
             ||     |                                                                                                  
             AC     A                                                                                                 
          GTA  ----- ATAAGTGTTTCGTATCAGAGGGTGTGTTGTGAAGTTTATTCTGGTGTGGTTTTCTTATGTGTAGTCTGAGAAAACAATTCTACGAGAAGAGGCGTAT

Get mature sequence
Get star sequence
Get miRNA stem-loop seqence
Get miRNA stem-loop ± 20bp
Get dot-bracket miRNA secondary structure

miRNA cluster info.

Cluster ID:
Chromosome:
Cluster start:
Cluster end:

No miRNA locus in ± 10k bp interval.

Expression info.

Reads per million (RPM)

Mature miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID	psRNAtarget	RNAhybrid	PARE-Seq? The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.
Lsat_1_v5_gn_0_37240.1	NA	4	NA
Lsat_1_v5_gn_1_16900.1	NA	4	NA
Lsat_1_v5_gn_1_22720.1	3	4	NA
Lsat_1_v5_gn_1_23900.1	3	4	NA
Lsat_1_v5_gn_1_25500.1	3	4	NA
Lsat_1_v5_gn_1_30080.1	NA	4	2
Lsat_1_v5_gn_1_44040.1	NA	4	NA
Lsat_1_v5_gn_1_64940.1	NA	4	NA
Lsat_1_v5_gn_1_74601.1	NA	4	NA
Lsat_1_v5_gn_1_78380.1	NA	4	2
Lsat_1_v5_gn_2_15901.1	2.5	NA	NA
Lsat_1_v5_gn_2_15941.1	3	NA	NA
Lsat_1_v5_gn_2_1961.1	NA	NA	2
Lsat_1_v5_gn_2_28420.1	NA	4	NA
Lsat_1_v5_gn_2_83120.1	NA	NA	2
Lsat_1_v5_gn_3_108821.1	NA	NA	2
Lsat_1_v5_gn_3_30180.1	NA	NA	2
Lsat_1_v5_gn_3_75940.1	NA	4	NA
Lsat_1_v5_gn_3_76880.1	NA	4	NA
Lsat_1_v5_gn_4_114800.1	NA	4	NA
Lsat_1_v5_gn_4_173140.1	NA	NA	2
Lsat_1_v5_gn_4_173421.1	NA	4	NA
Lsat_1_v5_gn_4_26380.1	NA	NA	2
Lsat_1_v5_gn_4_36301.1	NA	4	NA
Lsat_1_v5_gn_4_37901.1	2	NA	NA
Lsat_1_v5_gn_4_37921.1	NA	NA	2
Lsat_1_v5_gn_4_77881.1	NA	NA	2
Lsat_1_v5_gn_4_78921.1	NA	NA	2
Lsat_1_v5_gn_4_87281.1	NA	NA	2
Lsat_1_v5_gn_5_106501.1	NA	NA	2
Lsat_1_v5_gn_5_116021.1	NA	NA	2
Lsat_1_v5_gn_5_157681.1	NA	NA	2
Lsat_1_v5_gn_5_163100.1	NA	NA	2
Lsat_1_v5_gn_5_26201.1	NA	4	NA
Lsat_1_v5_gn_6_64460.1	NA	NA	2
Lsat_1_v5_gn_6_66140.1	NA	NA	2
Lsat_1_v5_gn_7_109440.1	NA	4	NA
Lsat_1_v5_gn_7_11700.1	NA	NA	2
Lsat_1_v5_gn_7_1921.1	NA	4	NA
Lsat_1_v5_gn_7_4861.1	NA	NA	2
Lsat_1_v5_gn_7_57261.1	NA	4	NA
Lsat_1_v5_gn_7_61721.1	NA	4	NA
Lsat_1_v5_gn_7_74040.1	NA	NA	2
Lsat_1_v5_gn_8_109901.1	3	NA	NA
Lsat_1_v5_gn_8_13601.1	NA	NA	2
Lsat_1_v5_gn_8_141661.1	NA	4	NA
Lsat_1_v5_gn_8_16621.1	NA	NA	2
Lsat_1_v5_gn_8_26701.1	3	4	NA
Lsat_1_v5_gn_8_28601.1	NA	NA	2
Lsat_1_v5_gn_8_32760.1	NA	NA	2
Lsat_1_v5_gn_8_33040.1	NA	NA	2
Lsat_1_v5_gn_8_55081.1	NA	NA	2
Lsat_1_v5_gn_8_63401.1	NA	NA	2
Lsat_1_v5_gn_8_67821.1	NA	NA	2
Lsat_1_v5_gn_8_81640.1	NA	4	NA
Lsat_1_v5_gn_8_84961.1	NA	4	NA
Lsat_1_v5_gn_9_113681.1	NA	NA	2
Lsat_1_v5_gn_9_114000.1	NA	4	NA
Lsat_1_v5_gn_9_117801.1	NA	4	NA
Lsat_1_v5_gn_9_118901.1	NA	4	NA
Lsat_1_v5_gn_9_119221.1	NA	NA	1
Lsat_1_v5_gn_9_124960.1	NA	4	NA
Lsat_1_v5_gn_9_22261.1	NA	NA	2
Lsat_1_v5_gn_9_32021.1	NA	4	NA
Lsat_1_v5_gn_9_32101.1	NA	NA	2
Lsat_1_v5_gn_9_42001.1	NA	4	NA
Lsat_1_v5_gn_9_48000.1	NA	NA	2
Lsat_1_v5_gn_9_4841.1	NA	NA	2
Lsat_1_v5_gn_9_52721.1	NA	NA	2
Lsat_1_v5_gn_9_59260.1	NA	NA	2
Lsat_1_v5_gn_9_7940.1	NA	NA	2
Lsat_1_v5_gn_9_89380.1	NA	NA	2