Lsa-MIRN1650

Basic info.

• miRNA locus ID
• Lsa-MIRN1650

• miRNA locus accession
• PmiREN000000181

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_0  11558545  11558674  +

• Comments
• A member of family MIRN1650

• Confidence level
• 

Secondary strurture and sequence

  AAT       T      T               T           ATCTAC      TTA  GAT
     TGGTTCG ATCATT ATTTAAACAGAGAAA CGCGGTTGAGA      TTGTGG   CT   
     ||||||| |||||| ||||||||||||||| |||||||||||      ||||||   ||    
     ACTAGGT TGGTAG TAAATTTGTCTCTTT GCGCCAATTCT      AATACC   GA   
CTTCC       T      T               -           -GTCTT      TAC  GCT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]