Lsa-MIR169h

Basic info.

• miRNA locus ID
• Lsa-MIR169h

• miRNA locus accession
• PmiREN000000057

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_4  134242916  134243064  +

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

       TT       TA       -               G    AATC   GAAAATAAATGATTATTGATTGTACT
    AGA  TAAGAGC  TTTGGAT AGCCAAGGATGACTT CCTA    CAT                          
    |||  |||||||  ||||||| ||||||||||||||| ||||    |||                           
    TCT  ATTCTCG  AAGTTTA TCGGTTTCTGCTGAA GGAT    TTG                          
ACTT   --       CA       C               -    -CTC   GTAAATTATCCAACAATTAACGTAAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 5
• Chromosome: Lsat_1_v8_lg_4
• Cluster start: 134242916
• Cluster end: 134250334

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]